IL_3J9Z_211

3D structure

PDB id

3J9Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3J9Z_211 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.1512

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

3J9Z|1|LA|U|1474
3J9Z|1|LA|G|1475
3J9Z|1|LA|U|1476
3J9Z|1|LA|A|1477
3J9Z|1|LA|G|1478
*
3J9Z|1|LA|U|1513
3J9Z|1|LA|G|1514
3J9Z|1|LA|A|1515
3J9Z|1|LA|G|1516
3J9Z|1|LA|G|1517

Current chains

Chain LA

23S ribosomal RNA

Nearby chains