IL_3JA1_055

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

3JA1|1|LA|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_055 not in the Motif Atlas

Homologous match to IL_5J7L_297

Geometric discrepancy: 0.2203

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

3JA1|1|LA|C|1437
3JA1|1|LA|U|1438
3JA1|1|LA|A|1439
3JA1|1|LA|U|1440
*
3JA1|1|LA|A|1551
3JA1|1|LA|A|1552
3JA1|1|LA|A|1553
3JA1|1|LA|U|1554
3JA1|1|LA|G|1555

Current chains

Chain LA

23S ribosomal RNA

Nearby chains