IL_3JA1_158
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GACAU*AC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JA1_158 not in the Motif Atlas
- Homologous match to IL_5J7L_043
- Geometric discrepancy: 0.241
- The information below is about IL_5J7L_043
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_47078.3
- Basepair signature
- cWW-cWS-L-cWW-L
- Number of instances in this motif group
- 4
Unit IDs
3JA1|1|SA|G|993
3JA1|1|SA|A|994
3JA1|1|SA|C|995
3JA1|1|SA|A|996
3JA1|1|SA|U|997
*
3JA1|1|SA|A|1044
3JA1|1|SA|C|1045
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain SC
- 30S ribosomal protein S3
- Chain SN
- 30S ribosomal protein S14
Coloring options: