IL_3JA1_160

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUGC*GCC

Length

7 nucleotides

Bulged bases

3JA1|1|SA|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_160 not in the Motif Atlas

Geometric match to IL_1NBS_006

Geometric discrepancy: 0.2468

The information below is about IL_1NBS_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

3JA1|1|SA|G|1048
3JA1|1|SA|U|1049
3JA1|1|SA|G|1050
3JA1|1|SA|C|1051
*
3JA1|1|SA|G|1207
3JA1|1|SA|C|1208
3JA1|1|SA|C|1209

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SC

30S ribosomal protein S3

Chain SN

30S ribosomal protein S14