IL_3JA1_161
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUGCAU*AUGG
- Length
- 10 nucleotides
- Bulged bases
- 3JA1|1|SA|C|1054
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JA1_161 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.3038
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
3JA1|1|SA|C|1051
3JA1|1|SA|U|1052
3JA1|1|SA|G|1053
3JA1|1|SA|C|1054
3JA1|1|SA|A|1055
3JA1|1|SA|U|1056
*
3JA1|1|SA|A|1204
3JA1|1|SA|U|1205
3JA1|1|SA|G|1206
3JA1|1|SA|G|1207
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain S1
- mRNA
- Chain SC
- 30S ribosomal protein S3
- Chain SJ
- 30S ribosomal protein S10
- Chain SN
- 30S ribosomal protein S14
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