IL_3JA1_175
3D structure
- PDB id
- 3JA1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 3JA1|1|SA|A|1492, 3JA1|1|SA|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JA1_175 not in the Motif Atlas
- Geometric match to IL_2O3X_001
- Geometric discrepancy: 0.3984
- The information below is about IL_2O3X_001
- Detailed Annotation
- Stack and bulge
- Broad Annotation
- Stack and bulge
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
3JA1|1|SA|C|1407
3JA1|1|SA|A|1408
3JA1|1|SA|C|1409
*
3JA1|1|SA|G|1491
3JA1|1|SA|A|1492
3JA1|1|SA|A|1493
3JA1|1|SA|G|1494
Current chains
- Chain SA
- 16S ribosomal RNA
Nearby chains
- Chain LA
- Large subunit ribosomal RNA; LSU rRNA
- Chain S1
- mRNA
- Chain S3
- Elongation factor G
- Chain SL
- 30S ribosomal protein S12
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