IL_3JA1_184

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGUAG*UGAGG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_184 not in the Motif Atlas

Homologous match to IL_5J7L_300

Geometric discrepancy: 0.2517

The information below is about IL_5J7L_300

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_38862.4

Basepair signature

cWW-cSH-R-tWH-tHS-cWW

Number of instances in this motif group

5

Unit IDs

3JA1|1|LA|U|1474
3JA1|1|LA|G|1475
3JA1|1|LA|U|1476
3JA1|1|LA|A|1477
3JA1|1|LA|G|1478
*
3JA1|1|LA|U|1513
3JA1|1|LA|G|1514
3JA1|1|LA|A|1515
3JA1|1|LA|G|1516
3JA1|1|LA|G|1517

Current chains

Chain LA

23S ribosomal RNA

Nearby chains