IL_3JA1_200

3D structure

PDB id

3JA1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUU*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JA1_200 not in the Motif Atlas

Geometric match to IL_8E4X_001

Geometric discrepancy: 0.1712

The information below is about IL_8E4X_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_10289.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

237

Unit IDs

3JA1|1|SA|G|833
3JA1|1|SA|U|834
3JA1|1|SA|U|835
*
3JA1|1|SA|G|851
3JA1|1|SA|G|852
3JA1|1|SA|C|853

Current chains

Chain SA

16S ribosomal RNA

Nearby chains

Chain SR

30S ribosomal protein S18