IL_3JAH_209

3D structure

PDB id

3JAH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.45 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

3JAH|1|9|A|668

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAH_209 not in the Motif Atlas

Homologous match to IL_4V88_416

Geometric discrepancy: 0.1737

The information below is about IL_4V88_416

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.3

Basepair signature

cWW-L-cWW-R-L-R

Number of instances in this motif group

5

Unit IDs

3JAH|1|9|G|665
3JAH|1|9|U|666
3JAH|1|9|U|667
3JAH|1|9|A|668
3JAH|1|9|A|669
3JAH|1|9|A|670
3JAH|1|9|A|671
*
3JAH|1|9|U|1161
3JAH|1|9|C|1162

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain XX

uS12

Chain aa

eS26