IL_3JAI_186

3D structure

PDB id

3JAI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.65 Å

Loop

Sequence

UGGU*AA

Length

6 nucleotides

Bulged bases

3JAI|1|9|G|113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JAI_186 not in the Motif Atlas

Homologous match to IL_4V88_392

Geometric discrepancy: 0.1832

The information below is about IL_4V88_392

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

3JAI|1|9|U|112
3JAI|1|9|G|113
3JAI|1|9|G|114
3JAI|1|9|U|115
*
3JAI|1|9|A|348
3JAI|1|9|A|349

Current chains

Chain 9

18S ribosomal RNA

Nearby chains

Chain EE

eS4

Chain II

eS8

Chain LL

uS17