IL_3JAI_271
3D structure
- PDB id
- 3JAI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UGA stop codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.65 Å
Loop
- Sequence
- UUUC*GAUA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAI_271 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.2947
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
3JAI|1|5|U|1671
3JAI|1|5|U|1672
3JAI|1|5|U|1673
3JAI|1|5|C|1674
*
3JAI|1|5|G|1681
3JAI|1|5|A|1682
3JAI|1|5|U|1683
3JAI|1|5|A|1684
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- eL13
- Chain Q
- eL18
- Chain T
- eL21
- Chain a
- uL15
- Chain b
- eL29
Coloring options: