IL_3JAM_034
3D structure
- PDB id
- 3JAM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CryoEM structure of 40S-eIF1A-eIF1 complex from yeast
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.46 Å
Loop
- Sequence
- GUUAAAA*UC
- Length
- 9 nucleotides
- Bulged bases
- 3JAM|1|2|A|618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAM_034 not in the Motif Atlas
- Homologous match to IL_4V88_416
- Geometric discrepancy: 0.1302
- The information below is about IL_4V88_416
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.3
- Basepair signature
- cWW-L-cWW-R-L-R
- Number of instances in this motif group
- 5
Unit IDs
3JAM|1|2|G|615
3JAM|1|2|U|616
3JAM|1|2|U|617
3JAM|1|2|A|618
3JAM|1|2|A|619
3JAM|1|2|A|620
3JAM|1|2|A|621
*
3JAM|1|2|U|1103
3JAM|1|2|C|1104
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain X
- uS12
- Chain a
- eS26
Coloring options: