IL_3JAN_182
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- UUA*UA
- Length
- 5 nucleotides
- Bulged bases
- 3JAN|1|S2|U|488
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAN_182 not in the Motif Atlas
- Geometric match to IL_4LFB_014
- Geometric discrepancy: 0.1755
- The information below is about IL_4LFB_014
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
3JAN|1|S2|U|487
3JAN|1|S2|U|488
3JAN|1|S2|A|489
*
3JAN|1|S2|U|511
3JAN|1|S2|A|512
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain S1
- SRP9
- Chain S4
- SRP14
- Chain SE
- Ribosomal protein eS4
- Chain SJ
- Ribosomal protein uS4
- Chain SY
- Ribosomal protein eS24
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