IL_3JAN_259
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GGCC*GAUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAN_259 not in the Motif Atlas
- Geometric match to IL_1JID_002
- Geometric discrepancy: 0.2329
- The information below is about IL_1JID_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
3JAN|1|5|G|1760
3JAN|1|5|G|1761
3JAN|1|5|C|1762
3JAN|1|5|C|1763
*
3JAN|1|5|G|1769
3JAN|1|5|A|1770
3JAN|1|5|U|1771
3JAN|1|5|C|1772
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: