IL_3JAN_269
3D structure
- PDB id
- 3JAN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the scanning state of the mammalian SRP-ribosome complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CGCG*CGGCG
- Length
- 9 nucleotides
- Bulged bases
- 3JAN|1|5|G|2711
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JAN_269 not in the Motif Atlas
- Geometric match to IL_4EYA_010
- Geometric discrepancy: 0.3794
- The information below is about IL_4EYA_010
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_51479.1
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
3JAN|1|5|C|2702
3JAN|1|5|G|2703
3JAN|1|5|C|2704
3JAN|1|5|G|2705
*
3JAN|1|5|C|2710
3JAN|1|5|G|2711
3JAN|1|5|G|2712
3JAN|1|5|C|2713
3JAN|1|5|G|2714
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain R
- Ribosomal protein eL19
- Chain U
- Ribosomal protein eL22
- Chain X
- Ribosomal protein uL23
- Chain k
- Ribosomal protein eL38
Coloring options: