IL_3JBN_003
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UCAAA*UGACAA
- Length
- 11 nucleotides
- Bulged bases
- 3JBN|1|A|A|474
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_003 not in the Motif Atlas
- Geometric match to IL_4V88_386
- Geometric discrepancy: 0.1526
- The information below is about IL_4V88_386
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_37842.2
- Basepair signature
- cWW-cWW-L-R-cWW-cWW-R-L
- Number of instances in this motif group
- 4
Unit IDs
3JBN|1|A|U|37
3JBN|1|A|C|38
3JBN|1|A|A|39
3JBN|1|A|A|40
3JBN|1|A|A|41
*
3JBN|1|A|U|472
3JBN|1|A|G|473
3JBN|1|A|A|474
3JBN|1|A|C|475
3JBN|1|A|A|476
3JBN|1|A|A|477
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- 40S ribosomal protein uS4
- Chain F
- 40S ribosomal protein eS4
Coloring options: