IL_3JBN_010
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CUACU*AUCG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_010 not in the Motif Atlas
- Geometric match to IL_3LOA_001
- Geometric discrepancy: 0.3057
- The information below is about IL_3LOA_001
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- UAA/GAN related
- Motif group
- IL_60988.2
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
3JBN|1|A|C|119
3JBN|1|A|U|120
3JBN|1|A|A|121
3JBN|1|A|C|122
3JBN|1|A|U|123
*
3JBN|1|A|A|302
3JBN|1|A|U|303
3JBN|1|A|C|304
3JBN|1|A|G|305
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain F
- 40S ribosomal protein eS4
- Chain L
- 40S ribosomal protein eS8
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