IL_3JBN_075
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UUG*UA
- Length
- 5 nucleotides
- Bulged bases
- 3JBN|1|A|U|1954
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_075 not in the Motif Atlas
- Homologous match to IL_8C3A_476
- Geometric discrepancy: 0.3681
- The information below is about IL_8C3A_476
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 94
Unit IDs
3JBN|1|A|U|1953
3JBN|1|A|U|1954
3JBN|1|A|G|1955
*
3JBN|1|A|U|2035
3JBN|1|A|A|2036
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain AA
- Large subunit ribosomal RNA; LSU rRNA
- Chain AM
- 60S ribosomal protein uL14
- Chain Ag
- 60S ribosomal protein eL41
- Chain Q
- 40S ribosomal protein uS12
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