IL_3JBN_129
3D structure
- PDB id
- 3JBN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GAC*GAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBN_129 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.3525
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_53541.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
3JBN|1|AA|G|1135
3JBN|1|AA|A|1136
3JBN|1|AA|C|1139
*
3JBN|1|AA|G|1158
3JBN|1|AA|A|1159
3JBN|1|AA|C|1160
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AQ
- 60S ribosomal protein uL16
- Chain AR
- 60S ribosomal protein uL18
Coloring options: