IL_3JBO_205
3D structure
- PDB id
- 3JBO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-electron microscopy reconstruction of the Plasmodium falciparum 80S ribosome bound to P/E-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.8 Å
Loop
- Sequence
- UGAGCU*GAGCUG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBO_205 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.3636
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
3JBO|1|AA|U|3636
3JBO|1|AA|G|3637
3JBO|1|AA|A|3638
3JBO|1|AA|G|3639
3JBO|1|AA|C|3640
3JBO|1|AA|U|3641
*
3JBO|1|AA|G|3644
3JBO|1|AA|A|3645
3JBO|1|AA|G|3646
3JBO|1|AA|C|3647
3JBO|1|AA|U|3648
3JBO|1|AA|G|3649
Current chains
- Chain AA
- 28S ribosomal RNA
Nearby chains
- Chain AN
- 60S ribosomal protein eL14
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