IL_3JBU_225
3D structure
- PDB id
- 3JBU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- AACGUC*GACAGUU
- Length
- 13 nucleotides
- Bulged bases
- 3JBU|1|b|A|2602
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBU_225 not in the Motif Atlas
- Geometric match to IL_8SSW_003
- Geometric discrepancy: 0.3553
- The information below is about IL_8SSW_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_82292.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
3JBU|1|b|A|2589
3JBU|1|b|A|2590
3JBU|1|b|C|2591
3JBU|1|b|G|2592
3JBU|1|b|U|2593
3JBU|1|b|C|2594
*
3JBU|1|b|G|2599
3JBU|1|b|A|2600
3JBU|1|b|C|2601
3JBU|1|b|A|2602
3JBU|1|b|G|2603
3JBU|1|b|U|2604
3JBU|1|b|U|2605
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain c
- 50S ribosomal protein L2
- Chain v
- Transfer RNA; tRNA
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