IL_3JBV_018
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- CAG*CAGAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_018 not in the Motif Atlas
- Homologous match to IL_5J7L_021
- Geometric discrepancy: 0.2917
- The information below is about IL_5J7L_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_33323.1
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
3JBV|1|A|C|440
3JBV|1|A|A|441
3JBV|1|A|G|442
*
3JBV|1|A|C|492
3JBV|1|A|A|493
3JBV|1|A|G|494
3JBV|1|A|A|495
3JBV|1|A|A|496
3JBV|1|A|G|497
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain D
- 30S ribosomal protein S4
Coloring options: