IL_3JBV_180
3D structure
- PDB id
- 3JBV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.32 Å
Loop
- Sequence
- UGGU*ACACA
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JBV_180 not in the Motif Atlas
- Geometric match to IL_9NLN_003
- Geometric discrepancy: 0.3874
- The information below is about IL_9NLN_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60988.3
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 9
Unit IDs
3JBV|1|A|U|952
3JBV|1|A|G|953
3JBV|1|A|G|954
3JBV|1|A|U|955
*
3JBV|1|A|A|1225
3JBV|1|A|C|1226
3JBV|1|A|A|1227
3JBV|1|A|C|1228
3JBV|1|A|A|1229
Current chains
- Chain A
- RNA (1530-MER)
Nearby chains
- Chain M
- 30S ribosomal protein S13
- Chain S
- 30S ribosomal protein S19
- Chain V
- Transfer RNA; tRNA
- Chain W
- Transfer RNA; tRNA
Coloring options: