IL_3JCE_006
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUAAG*CGUUAUAACC
- Length
- 16 nucleotides
- Bulged bases
- 3JCE|1|A|U|102
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCE_006 not in the Motif Atlas
- Geometric match to IL_4LFB_031
- Geometric discrepancy: 0.3924
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3JCE|1|A|G|80
3JCE|1|A|G|81
3JCE|1|A|U|82
3JCE|1|A|A|83
3JCE|1|A|A|84
3JCE|1|A|G|85
*
3JCE|1|A|C|97
3JCE|1|A|G|98
3JCE|1|A|U|99
3JCE|1|A|U|100
3JCE|1|A|A|101
3JCE|1|A|U|102
3JCE|1|A|A|103
3JCE|1|A|A|104
3JCE|1|A|C|105
3JCE|1|A|C|106
Current chains
- Chain A
- 23 ribosomal RNA
Nearby chains
- Chain U
- 50S ribosomal protein L24
- Chain Y
- 50S ribosomal protein L29
Coloring options: