IL_3JCE_011

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAG*CAAAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JCE_011 not in the Motif Atlas

Homologous match to IL_5J7L_254

Geometric discrepancy: 0.1584

The information below is about IL_5J7L_254

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_69440.3

Basepair signature

cWW-L-R-cSH-cWW

Number of instances in this motif group

3

Unit IDs

3JCE|1|A|U|293
3JCE|1|A|A|294
3JCE|1|A|G|295
*
3JCE|1|A|C|343
3JCE|1|A|A|344
3JCE|1|A|A|345
3JCE|1|A|A|346
3JCE|1|A|A|347

Current chains

Chain A

23 ribosomal RNA

Nearby chains

Chain U

50S ribosomal protein L24