IL_3JCE_051

3D structure

PDB id

3JCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

3JCE|1|A|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3JCE_051 not in the Motif Atlas

Homologous match to IL_7A0S_053

Geometric discrepancy: 0.1272

The information below is about IL_7A0S_053

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

3JCE|1|A|C|1437
3JCE|1|A|U|1438
3JCE|1|A|A|1439
3JCE|1|A|U|1440
*
3JCE|1|A|A|1551
3JCE|1|A|A|1552
3JCE|1|A|A|1553
3JCE|1|A|U|1554
3JCE|1|A|G|1555

Current chains

Chain A

23 ribosomal RNA

Nearby chains