IL_3JCE_142
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUAGAG*UGGAC
- Length
- 11 nucleotides
- Bulged bases
- 3JCE|1|a|A|665
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCE_142 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3767
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_49751.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
3JCE|1|a|G|661
3JCE|1|a|U|662
3JCE|1|a|A|663
3JCE|1|a|G|664
3JCE|1|a|A|665
3JCE|1|a|G|666
*
3JCE|1|a|U|740
3JCE|1|a|G|741
3JCE|1|a|G|742
3JCE|1|a|A|743
3JCE|1|a|C|744
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain f
- 30S ribosomal protein S6
- Chain o
- 30S ribosomal protein S15
- Chain r
- 30S ribosomal protein S18
Coloring options: