IL_3JCE_165
3D structure
- PDB id
- 3JCE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 3JCE|1|a|C|1400, 3JCE|1|a|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCE_165 not in the Motif Atlas
- Geometric match to IL_5J7L_058
- Geometric discrepancy: 0.1231
- The information below is about IL_5J7L_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 4
Unit IDs
3JCE|1|a|C|1399
3JCE|1|a|C|1400
3JCE|1|a|G|1401
*
3JCE|1|a|C|1501
3JCE|1|a|A|1502
3JCE|1|a|A|1503
3JCE|1|a|G|1504
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain 7
- mRNA
- Chain 8
- Transfer RNA; tRNA
- Chain e
- 30S ribosomal protein S5
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