IL_3JCJ_099
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AUCACUG*UAAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_099 not in the Motif Atlas
- Geometric match to IL_4LFB_048
- Geometric discrepancy: 0.3838
- The information below is about IL_4LFB_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89862.1
- Basepair signature
- cWW-L-tHS-L-R-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
3JCJ|1|A|A|2679
3JCJ|1|A|U|2680
3JCJ|1|A|C|2681
3JCJ|1|A|A|2682
3JCJ|1|A|C|2683
3JCJ|1|A|U|2684
3JCJ|1|A|G|2685
*
3JCJ|1|A|U|2724
3JCJ|1|A|A|2725
3JCJ|1|A|A|2726
3JCJ|1|A|A|2727
3JCJ|1|A|U|2728
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain J
- 50S ribosomal protein L14
- Chain M
- 50S ribosomal protein L17
- Chain O
- 50S ribosomal protein L19
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