IL_3JCJ_110
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- CAU*AG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_110 not in the Motif Atlas
- Homologous match to IL_4LFB_004
- Geometric discrepancy: 0.1947
- The information below is about IL_4LFB_004
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_51454.3
- Basepair signature
- cWW-cSH-cWW
- Number of instances in this motif group
- 45
Unit IDs
3JCJ|1|g|C|54
3JCJ|1|g|A|55
3JCJ|1|g|U|56
*
3JCJ|1|g|A|356
3JCJ|1|g|G|357
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain 3
- 30S ribosomal protein S20
- Chain f
- Translation initiation factor IF-2
Coloring options: