IL_3JCJ_140
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGUAG*CGUAGAGAU
- Length
- 15 nucleotides
- Bulged bases
- 3JCJ|1|g|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_140 not in the Motif Atlas
- Homologous match to IL_4LFB_031
- Geometric discrepancy: 0.1459
- The information below is about IL_4LFB_031
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_95727.1
- Basepair signature
- cWW-L-tSH-L-tHW-tHS-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
3JCJ|1|g|G|683
3JCJ|1|g|U|684
3JCJ|1|g|G|685
3JCJ|1|g|U|686
3JCJ|1|g|A|687
3JCJ|1|g|G|688
*
3JCJ|1|g|C|699
3JCJ|1|g|G|700
3JCJ|1|g|U|701
3JCJ|1|g|A|702
3JCJ|1|g|G|703
3JCJ|1|g|A|704
3JCJ|1|g|G|705
3JCJ|1|g|A|706
3JCJ|1|g|U|707
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain q
- 30S ribosomal protein S11
Coloring options: