IL_3JCJ_141
3D structure
- PDB id
- 3JCJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3JCJ_141 not in the Motif Atlas
- Homologous match to IL_5J7L_036
- Geometric discrepancy: 0.1079
- The information below is about IL_5J7L_036
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.2
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
3JCJ|1|g|G|774
3JCJ|1|g|G|775
3JCJ|1|g|G|776
3JCJ|1|g|A|777
3JCJ|1|g|G|778
*
3JCJ|1|g|U|804
3JCJ|1|g|C|805
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain 2
- 30S ribosomal protein S21
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain B
- 50S ribosomal protein L2
- Chain q
- 30S ribosomal protein S11
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