IL_3JCS_123
3D structure
- PDB id
- 3JCS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.8 Å
Loop
- Sequence
- GCAUGAG*UGAGGC
- Length
- 13 nucleotides
- Bulged bases
- 3JCS|1|5|A|105
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87260.1
- Basepair signature
- cWW-cWW-tSH-L-L-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
3JCS|1|5|G|38
3JCS|1|5|C|39
3JCS|1|5|A|40
3JCS|1|5|U|41
3JCS|1|5|G|42
3JCS|1|5|A|43
3JCS|1|5|G|44
*
3JCS|1|5|U|103
3JCS|1|5|G|104
3JCS|1|5|A|105
3JCS|1|5|G|106
3JCS|1|5|G|107
3JCS|1|5|C|108
Current chains
- Chain 5
- 26S epsilon ribosomal RNA
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain 3
- 26S gamma ribosomal RNA
- Chain 4
- Large subunit ribosomal RNA; LSU rRNA
- Chain B
- ribosomal protein L3
- Chain X
- ribosomal protein L24e
- Chain e
- ribosomal protein L31e
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