IL_3KFU_002

3D structure

PDB id

3KFU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the transamidosome

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCU*AGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GCU,AGC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3KFU_002 not in the Motif Atlas

Geometric match to IL_4LFB_063

Geometric discrepancy: 0.1996

The information below is about IL_4LFB_063

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

3KFU|1|N|G|10
3KFU|1|N|C|11
3KFU|1|N|U|12
*
3KFU|1|N|A|23
3KFU|1|N|G|24
3KFU|1|N|C|25

Current chains

Chain N

tRNA-Asn

Nearby chains

Chain B

Non-discriminating and archaeal-type aspartyl-tRNA synthetase