IL_3KTV_001

3D structure

PDB id

3KTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the human SRP19/S-domain SRP RNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.8 Å

Loop

Sequence

CGG*CUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3KTV_001 not in the Motif Atlas

Geometric match to IL_1L9A_003

Geometric discrepancy: 0.288

The information below is about IL_1L9A_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_70707.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

70

Unit IDs

3KTV|1|A|C|123
3KTV|1|A|G|124
3KTV|1|A|G|125
*
3KTV|1|A|C|225
3KTV|1|A|U|226
3KTV|1|A|G|227

Current chains

Chain A

SRP RNA

Nearby chains