IL_3KTW_001

3D structure

PDB id

3KTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the SRP19/S-domain SRP RNA complex of Sulfolobus solfataricus

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

GUGG*CCAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary: GUGG,CCAC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_3KTW_001 not in the Motif Atlas

Geometric match to IL_3WBM_003

Geometric discrepancy: 0.3158

The information below is about IL_3WBM_003

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

3KTW|1|C|G|149
3KTW|1|C|U|150
3KTW|1|C|G|151
3KTW|1|C|G|152
*
3KTW|1|C|C|180
3KTW|1|C|C|181
3KTW|1|C|A|182
3KTW|1|C|C|183

Current chains

Chain C

SRP RNA

Nearby chains