IL_3P49_004
3D structure
- PDB id
- 3P49 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a Glycine Riboswitch from Fusobacterium nucleatum
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- UUCA*UGAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UUCA,UGAA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3P49_004 not in the Motif Atlas
- Geometric match to IL_3WBM_002
- Geometric discrepancy: 0.1983
- The information below is about IL_3WBM_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
3P49|1|A|U|16
3P49|1|A|U|17
3P49|1|A|C|18
3P49|1|A|A|19
*
3P49|1|A|U|26
3P49|1|A|G|27
3P49|1|A|A|28
3P49|1|A|A|29
Current chains
- Chain A
- GLYCINE RIBOSWITCH
Nearby chains
- Chain B
- U1 small nuclear ribonucleoprotein A
Coloring options: