IL_3PIO_122
3D structure
- PDB id
- 3PIO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the synergistic antibiotic pair lankamycin and lankacidin in complex with the large ribosomal subunit
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- GGCGCU*AGUGACC
- Length
- 13 nucleotides
- Bulged bases
- 3PIO|1|X|A|455
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3PIO_122 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.2981
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
3PIO|1|X|G|35
3PIO|1|X|G|36
3PIO|1|X|C|37
3PIO|1|X|G|38
3PIO|1|X|C|39
3PIO|1|X|U|40
*
3PIO|1|X|A|451
3PIO|1|X|G|452
3PIO|1|X|U|453
3PIO|1|X|G|454
3PIO|1|X|A|455
3PIO|1|X|C|456
3PIO|1|X|C|457
Current chains
- Chain X
- RIBOSOMAL 23S RNA
Nearby chains
- Chain C
- 50S ribosomal protein L4
- Chain N
- 50S ribosomal protein L20
- Chain R
- 50S ribosomal protein L24
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