IL_3T1H_055
3D structure
- PDB id
- 3T1H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA lysine 3 (tRNALys3) bound to an mRNA with an AAA-codon in the A-site and Paromomycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.11 Å
Loop
- Sequence
- CGGAUU*AUGAAG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_3T1H_055 not in the Motif Atlas
- Geometric match to IL_4LFB_055
- Geometric discrepancy: 0.1001
- The information below is about IL_4LFB_055
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_57885.1
- Basepair signature
- cWW-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 8
Unit IDs
3T1H|1|A|C|1284
3T1H|1|A|G|1285
3T1H|1|A|G|1286
3T1H|1|A|A|1287
3T1H|1|A|U|1288
3T1H|1|A|U|1289
*
3T1H|1|A|A|1310
3T1H|1|A|U|1311
3T1H|1|A|G|1312
3T1H|1|A|A|1313
3T1H|1|A|A|1314
3T1H|1|A|G|1315
Current chains
- Chain A
- 16s rRNA
Nearby chains
- Chain M
- 30S ribosomal protein S13
- Chain S
- 30S ribosomal protein S19
- Chain V
- 30S ribosomal protein Thx
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