IL_3U5H_057
3D structure
- PDB id
- 3U5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GACACCACAAAA*UGAAAAUGGAUGGCGC
- Length
- 28 nucleotides
- Bulged bases
- 3U5H|1|5|C|1196, 3U5H|1|5|A|1302, 3U5H|1|5|U|1305
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_16330.1
- Basepair signature
- cWW-cWW-L-R-R-R-R-R-R-R-R-R-L-L-L-L-L-tHH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
3U5H|1|5|G|1194
3U5H|1|5|A|1195
3U5H|1|5|C|1196
3U5H|1|5|A|1197
3U5H|1|5|C|1198
3U5H|1|5|C|1199
3U5H|1|5|A|1200
3U5H|1|5|C|1201
3U5H|1|5|A|1202
3U5H|1|5|A|1203
3U5H|1|5|A|1204
3U5H|1|5|A|1205
*
3U5H|1|5|U|1299
3U5H|1|5|G|1300
3U5H|1|5|A|1301
3U5H|1|5|A|1302
3U5H|1|5|A|1303
3U5H|1|5|A|1304
3U5H|1|5|U|1305
3U5H|1|5|G|1306
3U5H|1|5|G|1307
3U5H|1|5|A|1308
3U5H|1|5|U|1309
3U5H|1|5|G|1310
3U5H|1|5|G|1311
3U5H|1|5|C|1312
3U5H|1|5|G|1313
3U5H|1|5|C|1314
Current chains
- Chain 5
- 25S rRNA
Nearby chains
- Chain 7
- 5S rRNA
Coloring options: