IL_3U5H_072

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGA*UUUUC

Length

8 nucleotides

Bulged bases

3U5H|1|5|U|1820, 3U5H|1|5|U|1821

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85638.1

Basepair signature

cWW-cWH-cWW

Number of instances in this motif group

43

Unit IDs

3U5H|1|5|G|1623
3U5H|1|5|G|1624
3U5H|1|5|A|1625
*
3U5H|1|5|U|1818
3U5H|1|5|U|1819
3U5H|1|5|U|1820
3U5H|1|5|U|1821
3U5H|1|5|C|1822

Current chains

Chain 5

25S rRNA

Nearby chains