IL_3U5H_122

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUAGUAC*GGAACAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_85647.7

Basepair signature

cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW

Number of instances in this motif group

25

Unit IDs

3U5H|1|5|C|3018
3U5H|1|5|U|3019
3U5H|1|5|U|3020
3U5H|1|5|A|3021
3U5H|1|5|G|3022
3U5H|1|5|U|3023
3U5H|1|5|A|3024
3U5H|1|5|C|3025
*
3U5H|1|5|G|3030
3U5H|1|5|G|3031
3U5H|1|5|A|3032
3U5H|1|5|A|3033
3U5H|1|5|C|3034
3U5H|1|5|A|3035
3U5H|1|5|G|3036

Current chains

Chain 5

25S rRNA

Nearby chains