IL_3U5H_127

3D structure

PDB id

3U5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution. This entry contains ribosomal RNA and ions of the 60S subunit, ribosome B

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCACAC*GCGUGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_58261.2

Basepair signature

cWW-cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

13

Unit IDs

3U5H|1|5|C|3161
3U5H|1|5|C|3162
3U5H|1|5|A|3163
3U5H|1|5|C|3164
3U5H|1|5|A|3165
3U5H|1|5|C|3166
*
3U5H|1|5|G|3284
3U5H|1|5|C|3285
3U5H|1|5|G|3286
3U5H|1|5|U|3287
3U5H|1|5|G|3288
3U5H|1|5|G|3289

Current chains

Chain 5

25S rRNA

Nearby chains