IL_4A1B_082

3D structure

PDB id

4A1B (explore in PDB, NAKB, or RNA 3D Hub)

Description

T.thermophila 60S ribosomal subunit in complex with initiation factor 6. This file contains 26S rRNA and proteins of molecule 3.

Experimental method

X-RAY DIFFRACTION

Resolution

3.52 Å

Loop

Sequence

CGUAAC*GGAUAAG

Length

13 nucleotides

Bulged bases

4A1B|1|1|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_72158.7

Basepair signature

cWW-tSH-tSH-tHH-tHS-cWW

Number of instances in this motif group

9

Unit IDs

4A1B|1|1|C|1942
4A1B|1|1|G|1943
4A1B|1|1|U|1944
4A1B|1|1|A|1945
4A1B|1|1|A|1946
4A1B|1|1|C|1947
*
4A1B|1|1|G|1952
4A1B|1|1|G|1953
4A1B|1|1|A|1954
4A1B|1|1|U|1955
4A1B|1|1|A|1956
4A1B|1|1|A|1957
4A1B|1|1|G|1958

Current chains

Chain 1

26S RRNA

Nearby chains