IL_4BTS_035

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CGUAG*UCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_035 not in the Motif Atlas

Homologous match to IL_4V88_418

Geometric discrepancy: 0.1149

The information below is about IL_4V88_418

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

4BTS|1|AA|C|621
4BTS|1|AA|G|622
4BTS|1|AA|U|623
4BTS|1|AA|A|624
4BTS|1|AA|G|625
*
4BTS|1|AA|U|946
4BTS|1|AA|C|947
4BTS|1|AA|A|948
4BTS|1|AA|A|949
4BTS|1|AA|G|950

Current chains

Chain AA

18S ribosomal RNA

Nearby chains

Chain AH

40S RIBOSOMAL PROTEIN RPS22E

Chain AL

40S RIBOSOMAL PROTEIN S12

Chain AO

40S RIBOSOMAL PROTEIN RPS13E

Chain AQ

40S RIBOSOMAL PROTEIN RPS11E