IL_4BTS_063
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UGG*UCUGUGA
- Length
- 10 nucleotides
- Bulged bases
- 4BTS|1|AA|C|1402, 4BTS|1|AA|U|1403, 4BTS|1|AA|G|1406
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_063 not in the Motif Atlas
- Geometric match to IL_4V88_451
- Geometric discrepancy: 0.1552
- The information below is about IL_4V88_451
- Detailed Annotation
- Minor groove platform with extra cWW
- Broad Annotation
- Minor groove platform
- Motif group
- IL_97255.1
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
4BTS|1|AA|U|1248
4BTS|1|AA|G|1249
4BTS|1|AA|G|1250
*
4BTS|1|AA|U|1401
4BTS|1|AA|C|1402
4BTS|1|AA|U|1403
4BTS|1|AA|G|1404
4BTS|1|AA|U|1405
4BTS|1|AA|G|1406
4BTS|1|AA|A|1407
Current chains
- Chain AA
- 18S ribosomal RNA
Nearby chains
- Chain A7
- 40S RIBOSOMAL PROTEIN RPS10E
- Chain A9
- 40S RIBOSOMAL PROTEIN RPS31E
- Chain AC
- 40S RIBOSOMAL PROTEIN RPS3E
- Chain AJ
- 40S RIBOSOMAL PROTEIN RPS20E
- Chain AN
- 40S RIBOSOMAL PROTEIN RPS29E
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