IL_4BTS_096

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

4BTS|1|BA|A|110, 4BTS|1|BA|G|111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_096 not in the Motif Atlas

Homologous match to IL_4V88_392

Geometric discrepancy: 0.1859

The information below is about IL_4V88_392

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.1

Basepair signature

cWW-cWW

Number of instances in this motif group

34

Unit IDs

4BTS|1|BA|U|109
4BTS|1|BA|A|110
4BTS|1|BA|G|111
4BTS|1|BA|U|112
*
4BTS|1|BA|A|291
4BTS|1|BA|G|292

Current chains

Chain BA

18S ribosomal RNA

Nearby chains

Chain B2

40S RIBOSOMAL PROTEIN S8

Chain BQ

40S RIBOSOMAL PROTEIN RPS11E

Chain BW

40S RIBOSOMAL PROTEIN RPS4E