IL_4BTS_104
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- UAUCAG*CAGUCACG
- Length
- 14 nucleotides
- Bulged bases
- 4BTS|1|BA|U|304, 4BTS|1|BA|U|342
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_104 not in the Motif Atlas
- Homologous match to IL_4V88_402
- Geometric discrepancy: 0.1129
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
4BTS|1|BA|U|302
4BTS|1|BA|A|303
4BTS|1|BA|U|304
4BTS|1|BA|C|305
4BTS|1|BA|A|306
4BTS|1|BA|G|307
*
4BTS|1|BA|C|339
4BTS|1|BA|A|340
4BTS|1|BA|G|341
4BTS|1|BA|U|342
4BTS|1|BA|C|343
4BTS|1|BA|A|344
4BTS|1|BA|C|345
4BTS|1|BA|G|346
Current chains
- Chain BA
- 18S ribosomal RNA
Nearby chains
- Chain B2
- 40S RIBOSOMAL PROTEIN S8
- Chain BL
- 40S RIBOSOMAL PROTEIN S12
- Chain BQ
- 40S RIBOSOMAL PROTEIN RPS11E
Coloring options: