IL_4BTS_207
3D structure
- PDB id
- 4BTS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUUC
- Length
- 16 nucleotides
- Bulged bases
- 4BTS|1|CA|A|573
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4BTS_207 not in the Motif Atlas
- Homologous match to IL_8C3A_425
- Geometric discrepancy: 0.1778
- The information below is about IL_8C3A_425
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.2
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
4BTS|1|CA|G|556
4BTS|1|CA|U|557
4BTS|1|CA|G|558
4BTS|1|CA|C|559
4BTS|1|CA|C|560
4BTS|1|CA|A|561
4BTS|1|CA|G|562
*
4BTS|1|CA|C|569
4BTS|1|CA|G|570
4BTS|1|CA|G|571
4BTS|1|CA|U|572
4BTS|1|CA|A|573
4BTS|1|CA|A|574
4BTS|1|CA|U|575
4BTS|1|CA|U|576
4BTS|1|CA|C|577
Current chains
- Chain CA
- 18S ribosomal RNA
Nearby chains
- Chain C0
- TRANSLATION INITIATION FACTOR EIF-1A FAMILY PROTEIN
- Chain CC
- 40S RIBOSOMAL PROTEIN RPS3E
- Chain CL
- 40S RIBOSOMAL PROTEIN S12
- Chain CX
- 40S RIBOSOMAL PROTEIN RPS30E
Coloring options: