IL_4BTS_222

3D structure

PDB id

4BTS (explore in PDB, NAKB, or RNA 3D Hub)

Description

THE CRYSTAL STRUCTURE OF THE EUKARYOTIC 40S RIBOSOMAL SUBUNIT IN COMPLEX WITH EIF1 AND EIF1A

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

CAAAG*CGUAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4BTS_222 not in the Motif Atlas

Homologous match to IL_4V88_436

Geometric discrepancy: 0.1064

The information below is about IL_4V88_436

Detailed Annotation

tSH-tHW-tHS

Broad Annotation

No text annotation

Motif group

IL_17136.4

Basepair signature

cWW-R-L-tHS-tHW-cWW

Number of instances in this motif group

18

Unit IDs

4BTS|1|CA|C|968
4BTS|1|CA|A|969
4BTS|1|CA|A|970
4BTS|1|CA|A|971
4BTS|1|CA|G|972
*
4BTS|1|CA|C|988
4BTS|1|CA|G|989
4BTS|1|CA|U|990
4BTS|1|CA|A|991
4BTS|1|CA|G|992

Current chains

Chain CA

18S ribosomal RNA

Nearby chains

Chain CK

40S RIBOSOMAL PROTEIN RPS14E